genomic_algorithms

Practical sessions for the Johns Hopkins course, 'Algorithms for DNA Sequencing'

Name		Name	Last commit message	Last commit date
Latest commit History 7 Commits
ERR037900_1.first1000.fastq		ERR037900_1.first1000.fastq
ERR266411_1.first1000.fastq		ERR266411_1.first1000.fastq
LICENSE		LICENSE
README.md		README.md
SRR835775_1.first1000.fastq		SRR835775_1.first1000.fastq
lambda_virus.fa		lambda_virus.fa
m1_practical_1_StringBasics_ysong.ipynb		m1_practical_1_StringBasics_ysong.ipynb
m1_practical_2_ManipulatingDNAStrings_ysong.ipynb		m1_practical_2_ManipulatingDNAStrings_ysong.ipynb
m1_practical_3_DownloadParseGenome_ysong.ipynb		m1_practical_3_DownloadParseGenome_ysong.ipynb
m1_practical_4_5_working_w_seq_reads_ysong.ipynb		m1_practical_4_5_working_w_seq_reads_ysong.ipynb
m1_practical_6_7_marching_artificial_and_real_reads_pos_ysong.ipynb		m1_practical_6_7_marching_artificial_and_real_reads_pos_ysong.ipynb
m2_practical_1_implementing_boyer_moore_ysong.ipynb		m2_practical_1_implementing_boyer_moore_ysong.ipynb
m2_practical_2_implementing_kmer_index_ysong.ipynb		m2_practical_2_implementing_kmer_index_ysong.ipynb
module_1_assignment_ycsong.ipynb		module_1_assignment_ycsong.ipynb
phix.fa		phix.fa

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