Skip to content

scpca-nf v0.9.3

Choose a tag to compare

View all tags
@allyhawkins allyhawkins released this 04 Feb 19:21
· 574 commits to main since this release
v0.9.3
80e7bbb
This commit was created on GitHub.com and signed with GitHub’s verified signature.
GPG key ID: B5690EEEBB952194
Verified
Learn about vigilant mode.

What's Changed

  • Refactor counting reference cells for InferCNV
    • The infercnv_success boolean present in the metadata of objects when using --perform_cnv_inference has been replaced with the infercnv_status string
  • Minor updates to the QC report to adjust dot plot sizing based on the number of validation markers for consensus cell types
  • Update the consensus cell type reference to use OpenScPCA-analysis v0.2.4.
    This fixes a bug where consensus cell types were incorrectly unassigned if 2 out of 3 methods agreed but the third method was unable to assign a cell type.
  • The validation palette now contains colors for all possible validation groups as of OpenScPCA-analysis v0.2.4

Full Changelog: v0.9.2...v0.9.3

Assets 2
Loading