Releases: AllenInstitute/biofile-finder
Releases · AllenInstitute/biofile-finder
Release list
Tues, Jun 16, 2026
What's Changed
UI/general updates
- Remove icons from file access context menu by @Copilot in #755
- Auto supply IDR viewer for IDR images by @Copilot in #762
- Handle CORS errors explicitly with actionable error message by @Copilot in #754
- Allow thumbnails to become full screen on click by @Copilot in #756
- Make "Include files without values" checkbox more discoverable by @Copilot in #760
- Add Help > About menu with version number for desktop app by @Copilot in #768
- Don't show context menu when nothing is selected by @Copilot in #773
- Add drag-and-drop column reordering to file list header by @Copilot in #766
- Fix arrow key navigation breaking shift+click range selection by @Copilot in #759
- Bugfix/non-ascii character display by @aswallace in #786
- Prevent parameter from being undefined by @SeanDuHare in #788
- Fuzzy search -> Is exactly or contains by @SeanDuHare in #775
- Feature/refined button menu by @SeanDuHare in #785
- Support aggregate parquet data sources by @pgarrison in #787
- Feature/show all columns at once by @SeanDuHare in #782
- Optimize column width based on text length by @SeanDuHare in #784
- Feature/file list ux improvements by @SeanDuHare in #783
- #817 Don't confuse tables where one name is a prefix of the other by @pgarrison in #820
- Add Ctrl+A / Cmd+A keybind to select all files in current file set by @Copilot in #758
Query benchmarking
- feat: query benchmark system with DuckDB-WASM by @BrianWhitneyAI in #739
- Add test cases: aggregate 10M+10M, 20M by @pgarrison in #806
- New browser instance per benchmark task by @pgarrison in #808
- Fast benchmark mode by @pgarrison in #819
Compute endpoint, AllCellsMaskSegmentation pipeline
- AllCellsMaskSegmentation by @BrianWhitneyAI in #633
- Fix: use loadBalancerBaseUrl for compute endpoint by @BrianWhitneyAI in #794
- loadBalancer http->https by @BrianWhitneyAI in #811
- Add User field to All Cells Mask modal by @BrianWhitneyAI in #793
- Add PipelineService and wire into redux state by @BrianWhitneyAI in #798
- Add ComputePipelineModal and useComputePipelineMenuItems by @BrianWhitneyAI in #799
- Remove AllCellsMaskSegmentation by @BrianWhitneyAI in #800
- bugfix/pipeline-card-info by @BrianWhitneyAI in #814
Provenance updates
- Feature/provenance updates by @aswallace in #804
- Open query from relationship diagram in new tab by @aswallace in #805
- Feature/provenance redraw from panel by @aswallace in #810
- Feature/provenance query params by @aswallace in #826
- Remove dependence on File ID in provenance graph by @aswallace in #828
- Unset provenance origin when opening new query by @aswallace in #834
Dependency updates
- Admin/Update node by @aswallace in #830
- Bump form-data from 4.0.5 to 4.0.6 by @dependabot[bot] in #838
- Bump launch-editor from 2.13.1 to 2.14.1 by @dependabot[bot] in #835
- Bump @babel/core from 7.29.0 to 7.29.6 by @dependabot[bot] in #836
- Bump esbuild and tsx by @dependabot[bot] in #837
- Bump flatted from 3.3.4 to 3.4.2 by @dependabot[bot] in #840
- Bump lodash from 4.17.23 to 4.18.1 by @dependabot[bot] in #842
- Use SHA for actions in release and deployment workflows by @aswallace in #843
New Contributors
- @Copilot made their first contribution in #755
Full Changelog: v8.9.3...v9.0.0
Monday, Apr 27, 2026
What's Changed
- Fix number range picker blocking input for out-of-bounds intermediate values by @BrianWhitneyAI in #735
- Fix number range filter breaking on page refresh by @BrianWhitneyAI in #734
- Manage localstorage cookies by @aswallace in #720
- Fix loading metadata descriptor files by @aswallace in #732
- Add provenance file option to data source prompt by @aswallace in #741
- Bugfix: delete last query in panel by @aswallace in #746
- Bugfix: cast File Path to VARCHAR before TRIM and regex ops to handle BI… by @BrianWhitneyAI in #748
Full Changelog: v8.9.1...v8.9.3
Thursday, Apr 9, 2026
What's Changed
- Bugfix: grouping with new annotation types by @aswallace in #731
Full Changelog: v8.9.0...v8.9.1
Wednesday, Apr 8, 2026
What's Changed
- Add data type support for CSV data sources by @BrianWhitneyAI in #717
- Add data type support for Parquet and JSON data sources (number, boolean, duration, date, datetime) by @BrianWhitneyAI in #716
Full Changelog: v8.8.1...v8.9.0
Wednesday, Apr 1, 2026
What's Changed
- Register input files under the same name as their data source by @pgarrison in #671
- Fix improper merge: No quotes around parquet_scan() by @pgarrison in #696
- Partial parquet reads by @pgarrison in #698
- Allow file name wrapping by @aswallace in #704
- Bugfix: combine data sources by @aswallace in #700
- Add new query instead of combining by @aswallace in #706
- Improve tutorial experience by @aswallace in #708
- Fix plentiful file list fetches by @SeanDuHare in #715
Full Changelog: v8.8.0...v8.8.1
Tuesday, Mar 17, 2026
What's Changed
- Separate download logic from S3 handling by @SeanDuHare in #664
- Direct From Parquet mode: MVP by @pgarrison in #666
- (Small) Remove
storageidfrom Vol-E URL by @frasercl in #667 - Bugfix: dataset creation deregister by @BrianWhitneyAI in #670
- Bugfix:
data_typevs.column_typeby @pgarrison in #668 - Add FIJI as a viewer by @SeanDuHare in #665
- Bugfix: generate parquet file name from path by @BrianWhitneyAI in #675
- Render thumbnails if possible by @SeanDuHare in #677
- Stream zarr downloads to zip by @SeanDuHare in #687
- (Small) Downloads show false successes on desktop by @aswallace in #685
- Bugfix: Attempt to render thumbnail even when of unknown type by @SeanDuHare in #690
- Update website header menu by @aswallace in #691
- Database service web worker by @aswallace in #683
Full Changelog: v8.7.1...v8.8.0
Friday, Jan 30, 2026
What's Changed
- Fix SQL construction and add unit tests by @aswallace in #642
- Remove call to fetch total count from query footer by @aswallace in #643
- Provenance MVP by @SeanDuHare in #630
- Fix opening tiffs in Vol-E by @frasercl in #648
- Extend styling across entire row by @aswallace in #649
- Hide provenence addition button by @SeanDuHare in #660
- Fix S3 .tiff file downloads by @SeanDuHare in #644
Full Changelog: v8.7.0...v8.7.1
Monday, Jan 12, 2026
What's Changed
- Add Vol-E as .tiff viewer by default by @SeanDuHare in #609
- Update DuckDB-Wasm by @aswallace in #610
- Add a target zarr resolution to gallery view by @aswallace in #611
- Update code owners by @aswallace in #615
- File panel redesign by @aswallace in #616
- Refactor icon buttons to use new component by @aswallace in #619
- Fix unit test failure by @aswallace in #622
- Add featured section to datasets page by @aswallace in #624
- Autofocus searchbox input field by @aswallace in #623
- Query duplication logic by @aswallace in #629
- Switch from DuckDB Node to Wasm only by @aswallace in #627
- Open file selections and metadata in Vol-E v2 by @frasercl in #621
- Fix scroll behavior on datasets page by @aswallace in #628
New Contributors
Full Changelog: v8.6.1...v8.7.0
Friday, Oct 31, 2025
What's Changed
- Bugfix: Downloads failed silently for cloud-only files on desktop
Full Changelog: v8.6.0...v8.6.1
Fri, Oct 24, 2025
What's Changed
- Use Ome zarr.js for thumbnails by @will-moore in #598
- Feature/convert to zarr by @BrianWhitneyAI in #592
Full Changelog: v8.5.2...v8.6.0