Releases: Arcadia-Science/2026-spombe-dataset
Releases · Arcadia-Science/2026-spombe-dataset
Release list
v1.1.0
Adds spectral analysis and improves reproducibility for the S. pombe coherent Raman dataset pub.
New
- Extract and plot mean intensity-vs-wavenumber SRS/epiCARS spectra from lambda scans (
spectral_utils,viz_utils); notebook 01 plots the spectra and saves them as PNG/SVG, with a note on 16-bit SRS saturation.
Reproducibility
- Complete
pyproject.toml(pip install -e .now works reliably), pinnedenvs/dev.yml, documented tested platform, Zenodo download commands, removedsys.pathworkarounds.
Fixes
tqdmmisuse inbatch_export_images,np.trapzNumPy 2 deprecation, PR-template placeholder, stale doc/link cleanup.
Full details in CHANGELOG.md.
Code repository for S. pombe dataset pub v1.0
This release is associated with the pub titled, "Coherent Raman imaging of live, unfixed Schizosaccharomyces pombe and mutants dea2 and pdf1".