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Release v0.2.4

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@mgalland mgalland released this 15 Oct 13:47

The pipeline now outputs:

  1. A file called scaled_counts_from_kallisto.tsv which is a human-friendly wide format file that contains tab-separated scaled count values.
  2. One folder named kallisto that contains the bootstrap values per sample and that can be used in Sleuth analysis.

scaled_counts_from_kallisto.tsv output format:

target_id sample_01 sample_02 sample_03 sample_04 sample_05 sample_06 sample_07 sample_08
Solyc00g500063.1.1 51.7927335 56.4328456 49.1641227 9.1853026 14.9911621 13.5312404 12.5865526 10.3017012
Solyc00g500130.1.1 11.645641 12.0185262 13.0505986 3.96762667 2.75468946 5.74127494 5.17062419 4.25383049
Solyc00g500196.1.1 86.0507174 100.14843 99.9141849 31.0003963 23.0633263 21.8168448 17.1634808 21.7480359
Solyc00g500200.1.1 11.645641 12.0185262 13.0505986 3.96762667 2.75468946 5.74127494 5.17062419 4.25383049