bio-pipe

what does it do:

• simple biopipeline tool that inputs a dna sequence and cleans it.
• then using the --steps flag user can select any function in combination or all together from one of these:
  • clean
  • analyze
  • reversecomplement
  • translate
• gives the output in a user desired foled as report.txt and translation.txt

how to set up:

• no modules needed
• runs on python 3
• terminal command will look like this: python pipeline.py --input input/sample.fasta --steps clean analyze reversecomplement translate --output output\

terminal command and ouput files gif: