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Update PyTorch base container from 26.02 to 26.03#1540

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pstjohn merged 1 commit intoNVIDIA:mainfrom
svc-bionemo:svc-bionemo/update-pytorch-base-26.03
Apr 1, 2026
Merged

Update PyTorch base container from 26.02 to 26.03#1540
pstjohn merged 1 commit intoNVIDIA:mainfrom
svc-bionemo:svc-bionemo/update-pytorch-base-26.03

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Summary

Update all PyTorch base container references from 26.02-py3 to 26.03-py3.

Squashed image available at:
docker.io/svcbionemo023/bionemo-framework:pytorch26.03-py3-squashed

Files Changed (19)

  • 14 Dockerfiles in bionemo-recipes/ (models + recipes)
  • 3 CI workflow files (.github/workflows/)
  • 1 devcontainer Dockerfile
  • 1 README

Refs: BIO-289

Update all Dockerfiles, CI workflows, and devcontainer to use the new
PyTorch 26.03-py3 base image.

Squashed image available at:
  docker.io/svcbionemo023/bionemo-framework:pytorch26.03-py3-squashed

Refs: BIO-289
Signed-off-by: svc-bionemo <267129667+svc-bionemo@users.noreply.github.com>
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coderabbitai Bot commented Mar 31, 2026

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@pstjohn pstjohn added this pull request to the merge queue Apr 1, 2026
@github-merge-queue github-merge-queue Bot removed this pull request from the merge queue due to failed status checks Apr 1, 2026
@pstjohn pstjohn added this pull request to the merge queue Apr 1, 2026
@github-merge-queue github-merge-queue Bot removed this pull request from the merge queue due to failed status checks Apr 1, 2026
@pstjohn pstjohn added this pull request to the merge queue Apr 1, 2026
Merged via the queue into NVIDIA:main with commit 9d772b2 Apr 1, 2026
37 checks passed
github-merge-queue Bot pushed a commit that referenced this pull request Apr 17, 2026
…patibility (#1553)

## Problem

Nightly CI has been failing for 7 consecutive days (4/11–4/17) across
`models/mixtral`, `models/llama3`, `models/qwen`, and
`verify-recipe-tests`.

All failures share the same root cause:
```
AttributeError: 'HFInferenceParams' object has no attribute 'is_compileable'
```

The 26.03 PyTorch container update (#1540) brought
`transformers==5.5.4`, which added an `is_compileable` property check on
cache objects during `generate()`. The custom `HFInferenceParams` class
does not implement this property.

## Fix

Added `is_compileable` property returning `False` to `HFInferenceParams`
in all 6 affected files (4 model sources + 2 recipe copies). The
property returns `False` since this custom TE-based cache wrapper is not
compatible with `torch.compile`.

## Failing CI run
https://github.com/NVIDIA/bionemo-framework/actions/runs/24558420210

## Testing
- Pre-commit checks pass
- `check_copied_files.py` confirms all copies are in sync
- Fix is minimal and targeted (5 lines per file)

Signed-off-by: svc-bionemo <svc-bionemo@nvidia.com>
Signed-off-by: svc-bionemo <267129667+svc-bionemo@users.noreply.github.com>
Co-authored-by: svc-bionemo <267129667+svc-bionemo@users.noreply.github.com>
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3 participants