Python 3 / PyQt5, native Apple Silicon port of DEEPN.
New in v7: Stat Maker rebuilt again - runs DESeq2 twice per collation (raw counts + poscounts, and normalized PPM per Y2H-SCORES) giving both p-value_raw and p-value_norm; hit-criteria panel's Enrichment Fold filter replaced with a dual AdjEnr+DESeq2 agreement gate (locked defaults: in-frame:Forward>=80%, AdjEnr>0, DESeq2 log2FC>3x, p-value_raw<=0.01, P>0.8); new per-bait Matches results table; fixed a bug where single-bait (no Bait2) runs silently produced blank AdjEnr/P values. DEEPN's own Stat Maker button and the Stat Maker window title now both correctly read "v7" (previously unversioned / stuck at v3).
Assets
- DEEPN_26v7_macOS.zip - the main app (unzip and run, self-contained)
- StatMaker_26v7_macOS.zip - Stat Maker as a standalone app (also bundled inside DEEPN itself under Analyze Data)
- lists_data.zip -
hg38GeneList.prnandmm10GeneList.prn, excluded from the git repo (exceed GitHub's 100MB file limit). Only needed if building/running from source - unzip intolists/. Already included inside the prebuilt app bundles above.