Rename neurodsp to ibldsp to ensure IBL tests run

pyproject.toml

@@ -146,6 +146,9 @@ test_extractors = [
 test_preprocessing = [
     "ibllib>=3.4.1;python_version>='3.10'", # streaming IBL
     "torch",
+    # for IBL data fetching
+    "pooch",
+    "datalad"
 ]
 
 

src/spikeinterface/preprocessing/tests/test_detect_bad_channels.py

@@ -16,7 +16,7 @@
 # pip install ibl-neuropixel
 # note the check needs to find package first before submodule otherwise the check will fail if the library
 # does not exist
-if importlib.util.find_spec("neurodsp") is not None and importlib.util.find_spec("neurodsp.voltage") is not None:
+if importlib.util.find_spec("ibldsp") is not None and importlib.util.find_spec("ibldsp.voltage") is not None:
     HAVE_NPIX = True
 else:
     HAVE_NPIX = False
@@ -157,7 +157,7 @@ def test_detect_bad_channels_ibl(num_channels):
     however for testing it is necssary. So before calling the IBL function
     we need to rescale the traces to Volts.
     """
-    import neurodsp.voltage
+    import ibldsp.voltage
 
     # download_path = si.download_dataset(remote_path='spikeglx/Noise4Sam_g0')
     # recording = se.read_spikeglx(download_path, stream_id="imec0.ap")
@@ -201,7 +201,7 @@ def test_detect_bad_channels_ibl(num_channels):
     for i, random_chunk in enumerate(random_data):
         traces_uV = random_chunk.T
         traces_V = traces_uV * 1e-6
-        channel_flags, _ = neurodsp.voltage.detect_bad_channels(
+        channel_flags, _ = ibldsp.voltage.detect_bad_channels(
             traces_V,
             recording.get_sampling_frequency(),
             psd_hf_threshold=psd_cutoff,

src/spikeinterface/preprocessing/tests/test_interpolate_bad_channels.py

@@ -50,7 +50,7 @@ def test_detect_and_interpolate_bad_channel():
 
 
 @pytest.mark.skipif(
-    importlib.util.find_spec("neurodsp") is not None or importlib.util.find_spec("spikeglx") or ON_GITHUB,
+    importlib.util.find_spec("ibldsp") is None,
     reason="Only local. Requires ibl-neuropixel install",
 )
 def test_compare_real_data_with_ibl():
@@ -66,7 +66,7 @@ def test_compare_real_data_with_ibl():
     """
     # Download and load data
     import spikeglx
-    import neurodsp.voltage as voltage
+    import ibldsp.voltage as voltage
 
     local_path = si.download_dataset(remote_path="spikeglx/Noise4Sam_g0")
     si_recording = se.read_spikeglx(local_path, stream_id="imec0.ap")
@@ -107,7 +107,7 @@ def test_compare_real_data_with_ibl():
 
 
 @pytest.mark.skipif(
-    importlib.util.find_spec("neurodsp") is not None or importlib.util.find_spec("spikeglx") is not None,
+    importlib.util.find_spec("ibldsp") is None,
     reason="Requires ibl-neuropixel install",
 )
 @pytest.mark.parametrize("num_channels", [32, 64])
@@ -119,7 +119,7 @@ def test_compare_input_argument_ranges_against_ibl(shanks, p, sigma_um, num_chan
     Perform an extended test across a range of function inputs to check
     IBL and SI interpolation results match.
     """
-    import neurodsp.voltage as voltage
+    import ibldsp.voltage as voltage
 
     recording = generate_recording(num_channels=num_channels, durations=[1])