0.2.0rc1

What's Changed

• Fix SSHContextFactory retrieval logic by @LanderOtto in #931
• Fix uv pip uninstall in cwl conformance tests script by @LanderOtto in #934
• Implement __hash__ method in the ExecutionLocation by @LanderOtto in #933
• Added restore method by @LanderOtto in #864
• Refactor DirectedGraph class by @LanderOtto in #919
• Added type checking with mypy by @GlassOfWhiskey in #938
• Fix trivial mypy errors by @GlassOfWhiskey in #943
• Fix trivial mypy [var-annotated] errors by @GlassOfWhiskey in #944
• Migrate from cachetools to cachebox by @GlassOfWhiskey in #945
• Substitute manual quoting with shlex and mslex by @GlassOfWhiskey in #946
• Fix StreamFlowPath comparison by @GlassOfWhiskey in #948
• Add UnrecoverableWorkflowException by @LanderOtto in #954
• Improved InterWorkflowPort by @LanderOtto in #951
• Use official Docker setup action by @GlassOfWhiskey in #956
• Fix optional empty list output in CWL by @LanderOtto in #959
• Implement persistent shells for improved performance by @GlassOfWhiskey in #960
• Close Shell if an error occurs by @GlassOfWhiskey in #962
• Improve LoopCombinator by @LanderOtto in #952
• Improve RemotePathMapper performance by @GlassOfWhiskey in #970
• Adjust the get_path_processor method by @GlassOfWhiskey in #973
• Optimize SQLite performance and concurrency by @GlassOfWhiskey in #974
• Improve LocalStreamFlowPath.checksum() performance by @GlassOfWhiskey in #975
• Fix database relative path by @LanderOtto in #969
• Support files deduplication in RunCrate by @GlassOfWhiskey in #978
• Fix provenance with multiple equal files by @GlassOfWhiskey in #988
• Fix empty glob by @LanderOtto in #989
• Added --validate flag to streamflow run by @GlassOfWhiskey in #995
• Add tag to JobToken by @LanderOtto in #999
• Add Status.RECOVERED by @LanderOtto in #958
• Change propagation condition of InterWorkflowPort by @LanderOtto in #1001
• Fixed recovery of loops by @LanderOtto in #826
• Fixed synchronization of multiple recovery workflows by @LanderOtto in #822
• Implemented template validation in the CommandTemplateMap class by @LanderOtto in #916
• Fix notify of stacked locations by @LanderOtto in #1006
• Add FaultTolerance documentation by @LanderOtto in #1004
• Validate CWL when condition dependencies by @LanderOtto in #825
• Propagate mounts to wrapped locations in QueueManagerConnector by @GlassOfWhiskey in #947
• Fixed retrieving disk information in SingularityConnector by @LanderOtto in #894

Dependencies

• Bump aiohttp from 3.13.3 to 3.13.4 by @dependabot[bot] in #1010
• Bump cachetools from 6.2.4 to 6.2.6 by @dependabot[bot] in #932
• Bump cachetools from 6.2.6 to 7.0.0 by @dependabot[bot] in #936
• Bump cryptography from 46.0.3 to 46.0.5 by @dependabot[bot] in #949
• Bump cryptography from 46.0.5 to 46.0.6 by @dependabot[bot] in #1009
• Bump cwltool from 3.1.20260108082145 to 3.1.20260315121657 by @dependabot[bot] in #992
• Bump importlib-metadata from 8.7.1 to 8.8.0 by @dependabot[bot] in #996
• Bump importlib-metadata from 8.8.0 to 9.0.0 by @dependabot[bot] in #997
• Bump kubernetes-asyncio from 34.3.3 to 35.0.0 by @dependabot[bot] in #953
• Bump kubernetes-asyncio from 35.0.0 to 35.0.1 by @dependabot[bot] in #967
• Bump orjson from 3.11.5 to 3.11.6 by @dependabot[bot] in #991
• Bump plotly from 6.5.2 to 6.6.0 by @dependabot[bot] in #980
• Bump psutil from 7.2.1 to 7.2.2 by @dependabot[bot] in #935
• Bump pygments from 2.19.2 to 2.20.0 by @dependabot[bot] in #1011
• Bump rdflib from 7.5.0 to 7.6.0 by @dependabot[bot] in #993
• Bump requests from 2.32.5 to 2.33.0 by @dependabot[bot] in #1007

Dev Dependencies

• Bump actions/download-artifact from 7 to 8 by @dependabot[bot] in #971
• Bump actions/upload-artifact from 6 to 7 by @dependabot[bot] in #972
• Bump bandit from 1.9.3 to 1.9.4 by @dependabot[bot] in #966
• Bump black from 26.1.0 to 26.3.0 by @dependabot[bot] in #987
• Bump black from 26.3.0 to 26.3.1 by @dependabot[bot] in #990
• Bump codecov/codecov-action from 5 to 6 by @dependabot[bot] in #1008
• Bump codespell from 2.4.1 to 2.4.2 by @dependabot[bot] in #986
• Bump docker/build-push-action from 6 to 7 by @dependabot[bot] in #985
• Bump docker/login-action from 3 to 4 by @dependabot[bot] in #983
• Bump docker/setup-buildx-action from 3 to 4 by @dependabot[bot] in #984
• Bump docker/setup-compose-action from 1 to 2 by @dependabot[bot] in #976
• Bump docker/setup-docker-action from 4 to 5 by @dependabot[bot] in #979
• Bump docker/setup-qemu-action from 3 to 4 by @dependabot[bot] in #982
• Bump helm/kind-action from 1.13.0 to 1.14.0 by @dependabot[bot] in #957
• Bump isort from 7.0.0 to 8.0.0 by @dependabot[bot] in #961
• Bump isort from 8.0.0 to 8.0.1 by @dependabot[bot] in #977
• Bump mypy from 1.19.0 to 1.19.1 by @dependabot[bot] in #940
• Bump pandas-stubs from 2.3.3.251201 to 2.3.3.260113 by @dependabot[bot] in #942
• Bump pytest-cov from 7.0.0 to 7.1.0 by @dependabot[bot] in #1002
• Bump types-cachetools from 6.2.0.20251022 to 6.2.0.20260317 by @dependabot[bot] in #994
• Bump types-jsonschema from 4.25.1.20251009 to 4.26.0.20260202 by @dependabot[bot] in #941
• Bump types-jsonschema from 4.26.0.20260202 to 4.26.0.20260324 by @dependabot[bot] in #1003
• Bump types-jsonschema from 4.26.0.20260324 to 4.26.0.20260325 by @dependabot[bot] in #1005
• Bump types-psutil from 7.1.3.20251202 to 7.2.2.20260130 by @dependabot[bot] in #939

Full Changelog: 0.2.0.dev14...0.2.0rc1