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Random match correction

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@johnlees johnlees released this 02 Jul 14:05
· 636 commits to master since this release
29e72d8

New features:

  • Add parallelised sparse and dense matrix operations (#21, #23)
  • Used spaced seeds in hash function; store sketching version in HDF5 file (#22)
  • Chunk up distance calculation on the GPU, so any size is supported (#24)
  • Calculate random match chances via Monte Carlo simulation (#27)

Added CI testing:

  • Add new tests for matrix functions
  • Add test for distances compared to reference values

Test to be manually run:

  • Compare GPU and CPU distances