2025.2

What's Changed

• add support for sam, sam.gz, and sam.xz in micov compress by @sherlyn99 in #9
• Compress from bed by @wasade in #11
• WIP: General items by @wasade in #12
• PERF: rechunk on concat by @wasade in #14
• fixed typo and added taxonomy to micov compress by @sherlyn99 in #13
• extend compress to work with an input directory by @sherlyn99 in #15
• Restore stdin by @wasade in #17
• add micov bin for single genome of interest by @sherlyn99 in #18
• Unscaled cumulative plots, and cumulative with a null curve via Monte by @wasade in #19
• Decompose cumulative curves, decompose and generalize Monte Carlo curves by @wasade in #21
• Cleanup by @wasade in #22
• Implement genome ranking functionality for position plot genomes by @sherlyn99 in #25
• Add readme by @sherlyn99 in #24
• Add conda yml file by @cguccione in #26
• Refactoring by @wasade in #27
• pairwise ks by @wasade in #28
• Improved position plots by @wasade in #29
• Genome rank by @sherlyn99 in #30
• add genome ranking code by @sherlyn99 in #32
• Allow region slicing by @wasade in #31
• Remove setup.py by @wasade in #33
• Project items by @wasade in #34

New Contributors

• @sherlyn99 made their first contribution in #9
• @wasade made their first contribution in #11
• @cguccione made their first contribution in #26

Full Changelog: https://github.com/biocore/micov/commits/2025.2