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fix END in non VCF files with ref and alt columns

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@brentp brentp released this 09 Feb 18:44

v0.1.1

  • set number=1 when op=min see #40
  • fix when we get -0 converted to just '-' (#42)
  • when an annotation bed file has a header with 'ref' or 'reference' and 'alt' or 'alternate',
    then match on the ref and alt values defined in those columns (not just on position as for bed).
  • (vcfgo) allow double-digit number in header thanks @chapmanb
  • correct END position when using ref and alt from a file with only a position (infer end as start + len(ref)) [thanks Tomas].
  • about 15% performance improvement mostly due to go1.8