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@github-actions github-actions released this 05 Nov 03:17
v0.6.0
c722e16

Kvg hierarchical models (#173)

  • Refactored models into a hierarchical format

  • Updated inspect to have a BLAST-like display. Now includes option to ingest a second bam file to visualize corrected CBC and UMI.

  • Sift now verifies that the entirety of the cDNA structure is present.

  • Added SC tag, containing segment cigar strings.

  • Added umi_correct tool. (#172)

  • Added sift documentation

  • Changed default # threads for correct to 1 because of memory use.

  • Refactoring into a hierarchical HMM constitutes a #minor version bump.

  • Removed scsplit.

  • Updated annotate to only read in one model from a bam file.

  • Further updates for PR review.

  • Replaced mas10 test data.

  • Regenerated test data.

  • Now only supports one model per bam file.

Co-authored-by: Jonn Smith jonn-smith@users.noreply.github.com
Co-authored-by: James Webber jamestwebber@users.noreply.github.com
Co-authored-by: BumpVersion Action bumpversion@github-actions
Co-authored-by: Jonn Smith jonn@broadinstitute.org

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