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@dpark01 dpark01 released this 12 May 17:42
v2.0.21.2
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Learn about vigilant mode.

Major changes:

  • travis CI changes and cleanups, including new flattened-wdl deploy to github.com/broadinstitute/viral-ngs-staging [#62, #63]
  • updates to nextstrain workflows: adds tasks for augur traits, augur filter, and inserts augur traits optionally into the main workflow [#59]
  • metagenomics: addition of new workflows for classify_kraken2, classify_multi (which demonstrates kraken2-based human read depletion) as well as tasks for kraken2-based classification and database building, as well as blastx-based classification. Main workflows such as demux_plus or assemble_denovo have not yet changed default behavior until we get comfortable with the new workflows over various data sets. [#60]
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