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Gladstone Bioinformatics Workshops

All training materials are free to use by anyone at any time. Instructors regularly present these workshops at Gladstone and the UCSF Mission Bay Campus. Follow Gladstone's Data Science Training Program for upcoming events.

Generously supported by:

Learning Paths

Explore these curated sets of workshops to find the right path for you. Note that intermediate and advanced workshops require completion of earlier workshops before enrolling.

Biostats	Command Line	R Scripting	AI for research
Statistics for biologists	Computer skills for data science	Data analysis using R	AI Fluency

RNA-Seq	ATAC-seq	Machine Learning	Pathway Analysis
RNA-Seq analysis	scATAC-seq analysis	Machine Learning	Pathway analysis and modeling

• Also check out the workshops offered by UCSF's Data Science Initiative.

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Statistics for Biologists

   Experimental Design and Hypothesis Testing using R

    Statistics of Enrichment Analysis Methods

    Linear Mixed Effects Models in R

    Pipeline for Linear Mixed Effects Models in R

Computer Skills for Data Science

    Unix Command Line - parts I,II

    Using Git and GitHub*

    Introduction to CoreHPC

    Working on Wynton HPC*

    Working with Biomedical Graph Databases*

* Not currently offered

Machine Learning

    Machine Learning Using R

AI for Research

    AI Fluency for Biologists

Data Analysis Using R

    Introduction to R for Data Analysis

    Intermediate R for Data Visualization

RNA-Seq Analysis

    Introduction to RNA-Seq Analysis

    Single Cell RNA-Seq Analysis Using R

    Advanced RNA-seq Analysis Using R

ATAC-Seq Analysis

    scATAC-seq Analysis Using R

Pathway Analysis and Modeling

    Introduction to Pathway Analysis

    Introduction to Pathway Analysis Using R*

Introduction to Pathway Modeling*

* Not currently offered

Computational Genomics

    Genome-wide Association and Polygenic Risk Score Analysis*

    Whole Genome Sequence Analysis*

* Not currently offered

Network Analysis and Visualization

    Introduction to Cytoscape and Network Biology*

    Intermediate Cytoscape for Omics Data Visualization*

    Advanced Cytoscape Automation*

* Not currently offered