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v0.2.0: Merge pull request #4 from harmsm/main
Code now does:
- Simulation of experiments
- Processing raw reads (fastq through ln_cfu/condition)
- Independent modeling (extract that for each genotype independently)
- Hierarchical modeling (Bayesian analysis of theta together)
- Epistasis analysis
- Epistasis vs. [titrant] categorization analysis
- Various helpful plotting utilities.
Additionally, the API is now (roughly) stable. I antiquate no major changes to the simulation, raw-processing, or independent modeling code base. I expect to build out the hierarchical modeling codebase and clean up the utilities functions. None of these will be architectural changes, however, just minor refactors.