sage v5.0

Functional:

• support for SBX and Ultima
• new jitter default params for all seq-techs
• use Redux MSI prediction to set MS status for jitter params
• apply read edge condition to mqf calc

Technical:

• continue with invalid read contexts on non-human chromosomes and/or low positions

Bugs:

• visualiser: handle transcripts not starting coding at phase 1

Config:

• sequencing_type