Skip to content

Curated gene sets

Mamie Wang edited this page Mar 7, 2025 · 4 revisions

Gene sets

  • /data1/chanj3/HTA.lung.NE_plasticity.120122/ref/curated.small.100124.gmt
  • /data1/chanj3/HTA.lung.NE_plasticity.120122/ref/curated.large.100124.gmt
  • /data1/chanj3/morrill1/projects/HTA/data/biological_reference/spectra_gene_sets

TF list

  • /data1/chanj3/HTA.lung.NE_plasticity.120122/ref/allTFs_hg38.txt from SCENIC

TF to motif database

  • /data1/chanj3/HTA.lung.NE_plasticity.120122/ref/motifs-v10nr_clust-nr.hgnc-m0.001-o0.0.tbl from cistargetDBs

Clone this wiki locally