v1.1.0

numbat 1.1.0 - 11/28/2022

• Externalize phylogeny module as separate package (scistreer)

• Prepare for new CRAN version

• Better CNV state legends for plot_bulks

numbat 1.0.5 - 11/27/2022

• Fixing bugs #65, #66, #67

• Retire dependency on reshape2

numbat 1.0.4 - 11/20/2022

• Improving error handling and removing python dependency (argparse) in pileup_and_phase.R

• Allow plotting of mutliple annotations in plot_phylo_heatmap (thanks to @whtns)

• Adding diagnostic messages

numbat 1.0.3 - 10/09/2022

• Fail gracefully when no CNV remains after retest_bulks

• Passing gamma parameter to retest_bulks