0.6.1

Full Changelog: 0.6.0...0.6.1

0.6.0

This release changes the backend for computations to bioimage-py. This improves both the efficiency and usability of tasks that convert data to ome-zarr or other chunked formats.

What's Changed

• Migrate copy + downsaple, add API converter by @constantinpape in #144
• Add new CI and some clean up by @constantinpape in #146

Full Changelog: 0.5.5...0.6.0

0.5.5

What's Changed

• Pin elf version and update version by @constantinpape in #143

Full Changelog: 0.5.4...0.5.5

0.5.4

What's Changed

• Support memmap of tif image data by @constantinpape in #139
• Fix ome ngff schmea location and bump version by @constantinpape in #142
• Update all doc strings to bring them to a unified format by @constantinpape in #141

Full Changelog: 0.5.3...0.5.4

0.5.3

What's Changed

• Fix keys in project metadata by @imagejan in #138

Full Changelog: 0.5.2...0.5.3

0.5.2

What's Changed

• implement NGFF source validation by @martinschorb in #136
• Fix issues for 2d ome zarr data by @constantinpape in #137

Full Changelog: 0.5.1...0.5.2

0.5.1

What's Changed

• fix Windows paths in datasets by @martinschorb in #134

Full Changelog: 0.5.0...0.5.1

0.5.0

Release 0.5.0

The main change in this release is the switch to ome.zarr as default data format.

What's Changed

• Make suppress_warnings option accessible in validate_dataset by @imagejan in #107
• Fix issue in project validation by @constantinpape in #110
• Use micromamba in github actions by @constantinpape in #115
• add remote support for cross-dataset sources by @martinschorb in #114
• Fix remove data option in remove source by @constantinpape in #119
• introduce easybuild recipe by @martinschorb in #124
• Update description by @constantinpape in #126
• Enable skipping addition of the source to dataset.json in add_image by @constantinpape in #123
• do not warn if source is already in s3 format by @JonasHell in #129
• add test for 2D CLI by @martinschorb in #128

New Contributors

• @imagejan made their first contribution in #107
• @JonasHell made their first contribution in #129

Full Changelog: 0.4.5...0.5.0

Support for more table formats

What's Changed

• Don't require bb columns for the segmentation default table by @constantinpape in #99
• Add more table functionality by @constantinpape in #102
• fixes #100 by @martinschorb in #101
• Add support for morpholibJ table format by @constantinpape in #103

Full Changelog: 0.4.4...0.4.5

Minor fixes

What's Changed

• Start implementing transformation support for ome.zarr by @constantinpape in #94

Full Changelog: 0.4.3...0.4.4