v0.10.0
Feature release
- Switched variant calling to an explicitly diploid calling model.
- Added a
-fforce overwrite option tomedaka_consenses. - Refreshed E. coli benchmark to include effect of
racon. - Refreshed variant calling benchmarks.
- Added C. elegans assembly benchmarks to documentation.
- Fixed bug causing larger than requested overlap in inference chunks.
- Corrected parsing of region strings with multiple
:charaters - Fixed rare consensus stitching error.
Please do not attempt to use the "Source code" assets attached below for running medaka, they do not include medaka's model files.