v1.1.2

cjw85 released this 13 Oct 14:32

940c2d4

Bug fix and feature release

Fix issues in command-line argument parsing.
Add true ploidy-1 variant caller.
Do not break contigs at unpolished regions (fill with input instead).
Add multi-nucleotide variant decomposition to be compatible with DeepVariant.

Please do not attempt to use the "Source code" assets attached below for running medaka, they do not include medaka's model files.

Assets 2