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Update to topic pirate - #12596

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LouisLeNezet merged 1 commit into
nf-core:masterfrom
LouisLeNezet:pirate
Aug 7, 2026
Merged

Update to topic pirate#12596
LouisLeNezet merged 1 commit into
nf-core:masterfrom
LouisLeNezet:pirate

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PR checklist

Closes #12556

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the module conventions in the contribution docs
  • If necessary, include test data in your PR.
  • Remove all TODO statements.
  • Broadcast software version numbers to topic: versions - See version_topics
  • Follow the naming conventions.
  • Follow the parameters requirements.
  • Follow the input/output options guidelines.
  • Add a resource label
  • Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • nf-core modules test <MODULE> --profile docker
      • nf-core modules test <MODULE> --profile singularity
      • nf-core modules test <MODULE> --profile conda
    • For subworkflows:
      • nf-core subworkflows test <SUBWORKFLOW> --profile docker
      • nf-core subworkflows test <SUBWORKFLOW> --profile singularity
      • nf-core subworkflows test <SUBWORKFLOW> --profile conda

@LouisLeNezet LouisLeNezet self-assigned this Aug 5, 2026
@LouisLeNezet
LouisLeNezet added this pull request to the merge queue Aug 7, 2026
Merged via the queue into nf-core:master with commit 382d2a2 Aug 7, 2026
23 checks passed
@LouisLeNezet
LouisLeNezet deleted the pirate branch August 7, 2026 07:39
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Migrate to topic pirate

2 participants