v0.9.6 cran

Enhancements

• Added errorbar_width and linetype parameters to g_lineplot.
• Added the .formats argument to tabulate_rsp_subgroups and tabulate_survival_subgroups to allow users to specify formats.
• Added the riskdiff argument to tabulate_rsp_subgroups and tabulate_survival_subgroups to allow users to add a risk difference table column, and function control_riskdiff to specify settings for the risk difference column.
• Added warning to tabulate_rsp_subgroups when pval statistic is selected but df has not been correctly generated to add p-values to the output table.
• Added n_rate statistic as a non-default option to estimate_incidence_rate which returns both number of events observed and estimated incidence rate.
• Added n_unique statistic as a non-default option to estimate_incidence_rate which returns total number of patients with at least one event observed.
• Refactored estimate_incidence_rate to work as both an analyze function and a summarize function, controlled by the added summarize parameter. When summarize = TRUE, labels can be fine-tuned via the new label_fmt argument to the same function.
• Added fraction statistic to the analyze_var_count method group.
• Improved summarize_glm_count() documentation and all its associated functions to better describe the results and the functions' purpose.

Bug Fixes

• Added defaults for d_count_cumulative parameters as described in the documentation.
• Fixed a bug of empty levels on g_lineplot x-axis were not shown in either plots.
• Fixed a bug in a_surv_time that threw an error when split only has "is_event".
• Fixed disappearing line in g_lineplot when using only one group or strata level.
• Fixed defaults for formats and labels in get_formats_from_stats and get_labels_from_stats.
• Fixed bug for linear scaling factor (scale parameter) being applied to response but not to rate in h_glm_count while all distributions have logarithmic link function.
• Fixed bug in decorate_grob that did not handle well empty strings or NULL values for title and footers.
• Fixed bug in g_km that caused an error when multiple records in the data had estimates at max time.
• Fixed issue with wrong wrapping due to different \n and vector behavior that did not cope well with split_string().

Miscellaneous

• Began deprecation of the confusing functions summary_formats and summary_labels.
• Enhanced general descriptions of analyze and summarize functions throughout package documentation.
• Finalized deprecation of the strata and cohort_id arguments to g_lineplot.
• Moved incidence rate helper functions into a separate h_incidence_rate.R file.

What's Changed

• Bumps {rmarkdown} minimal version by @averissimo in #1247
• Fixes problem with a_surv_time with datasets where "is_event" is always TRUE by @averissimo in #1260
• Update of g_lineplot to have line type, error bar width, and avoid empty levels in by @Melkiades in #1261
• Fixing parameters' defaults for d_count_cumulative by @Melkiades in #1264
• Fix typo in has_fraction_in_any_col example by @edelarua in #1266
• update feature yml by @shajoezhu in #1270
• rework docs summarize_glm_count by @Melkiades in #1269
• Fix get_labels_from_stats test by @edelarua in #1272
• Workflow propagations by @walkowif in #1275
• add lookup-refs param to rhub workflow by @pawelru in #1277
• Add riskdiff argument to tabulate_rsp_subgroups and tabulate_survival_subgroups by @edelarua in #1276
• fix decorate_grob for empty strings by @Melkiades in #1278
• Fix g_km bug when multiple estimates are made at max time by @edelarua in #1280
• Update DESCRIPTION by @pawelru in #1288
• Update DESCRIPTION emmeans to 1.10.4 by @shajoezhu in #1284
• update readme by @pawelru in #1290
• Fix URLs by @edelarua in #1298
• Add warning for missing p-value in tabulate_rsp_subgroups() output by @edelarua in #1296
• Add n_rate statistic to estimate_incidence_rate() by @edelarua in #1295
• Improve analyze/summarize function documentation by @edelarua in #1283
• Finalize deprecation of <0.9.4 arguments by @edelarua in #1304
• fix grob wrapping final by @Melkiades in #1305
• Workflow propagations by @walkowif in #1291
• Update DESCRIPTION, upversion formatters minimal version to 0.5.9 by @shajoezhu in #1308
• feat: added "fraction" statistic to the "analyze_var_count" method group by @kpagacz in #1309
• resolve green ci by @shajoezhu in #1293
• Refactor estimate_incidence_rate by @edelarua in #1300
• prep for rspm release 0.9.6, [skip vbump] by @shajoezhu in #1311

Full Changelog: v0.9.5...v0.9.6