DeepProfiler feature extraction

DeepProfiler extraction for SPECS2K, SPECS3K and Beactica data.

Includes main DeepProfiler preparation script (to be run using existing projectfolder) and pre-trained weights.

Extraction based on:

Moshkov, N., Bornholdt, M., Benoit, S. et al. Learning representations for image-based profiling of perturbations. Nat Commun 15, 1594 (2024). https://doi.org/10.1038/s41467-024-45999-1

https://github.com/cytomining/DeepProfiler