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Releases: ratschlab/secedo

Minor release: support for specifying an estimated tumor purity

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@danieldanciu danieldanciu released this 04 May 09:01

Changes:

  • using the flag tumor_purity can be used to specify an estimated tumor purity, if available. Valid values are 1:10-90, 2:20-80, 3:30-70, 4:40-60, 5:50-50 split.

Full Changelog: v1.0.6...v.1.0.7

Updated values of p_het and p_mut to better reflect priors from the literature.

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@danieldanciu danieldanciu released this 03 May 10:19
v1.0.6

Remove outdated comment

Secedo with working pileup installation

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@danieldanciu danieldanciu released this 07 Mar 10:22

Fixes a missing library in the pileup binary installation.

Fixes warnings in command lines

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@danieldanciu danieldanciu released this 16 Feb 10:55
v1.0.4

Fix command line arguments warning

Binary used in the SECEDO paper

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@danieldanciu danieldanciu released this 15 Feb 09:36
v1.0.3

Add hdf5 as env dependency. Install dynamic library deps