Adopt tskit-dev repo administration principles#273
Merged
jeromekelleher merged 6 commits intosgkit-dev:mainfrom Apr 1, 2026
Merged
Adopt tskit-dev repo administration principles#273jeromekelleher merged 6 commits intosgkit-dev:mainfrom
jeromekelleher merged 6 commits intosgkit-dev:mainfrom
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Modernise the repo tooling to follow the conventions documented in tskit-dev/.github/repo_administration.md: - Migrate to uv for dependency management with committed uv.lock - Add PEP 735 dependency-groups (test, lint, packaging, wheels, dev) - Replace .pre-commit-config.yaml with prek.toml (local hooks only, including clang-format for C code) - Pin lint tools (ruff==0.15.1, prek==0.3.3, clang-format==19.1.7) - Upgrade ruff, remove stale UP038 ignore, fix lint/format violations - Fix clang-format off/on markers in _vcztoolsmodule.c - Rewrite CI workflows to use uv (astral-sh/setup-uv@v6) - Migrate CD from Docker-based manylinux builds to cibuildwheel, adding macOS arm64/x86_64 wheel support - Add [tool.cibuildwheel] config to pyproject.toml - Remove .github/workflows/docker/ directory - Add CONTRIBUTING.md and .github/dependabot.yml
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I think this is ready to go in @tomwhite - if we're happy to move to uv-based approach. I'll need to do some follow-ups to make sure CD is working properly, as we've moved over to cibuildwheel and it'll need a bit of finessing. I'd also like to start supporting windows too, if at all possible. |
tomwhite
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Apr 1, 2026
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This looks great @jeromekelleher. I've given it a quick look, and I'm happy for you to merge if everything is working from your point of view.
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Modernise the repo tooling to follow the conventions documented in tskit-dev/.github/repo_administration.md: