bambu-nf 1.0.0
Initial release of shahcompbio/bambu-nf, created with the nf-core template.
Added
- Transcript assembly & quant with bambu
- Flags to pre-filter reads before assembly on read length & mapq (useful for samples with inadequate QC)
- Flags to pre-filter reads on accessory chromosomes (can sometimes cause issues for Bambu)
- Flag to adjust NDR in bambu