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adaptive-sequencing

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merfre / Adaptive_Sequencing_Analysis_Workflow

Snakemake workflow for ONT adaptive sequencing data integrating QC, taxonomy (Kraken2), rejected read analysis, and control vs adaptive comparison.

workflow bioinformatics snakemake nanopore taxonomy metagenomics microbiome reproducibility kraken2 adaptive-sequencing

Updated Apr 18, 2026
Python

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