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Aug 4, 2014 - Perl
#
atac-seq
Here are 173 public repositories matching this topic...
reports generated by ataqv for Gaulton lab ATAC data
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Aug 30, 2017 - JavaScript
Data analysis scripts for Rendeiro et. al, 2016 (doi:10.1038/ncomms11938)
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Nov 10, 2017 - Python
Side project to find jointly accessible regions in pairs of celltypes
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Jan 25, 2018 - Shell
cisVar scripts.
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May 18, 2018 - Python
CSBB - Computational Suite For Bioinformaticians and Biologists
rna-seq
statistics
correlation
heatmap
pipelines
pca
scatter-plot
chip-seq
atac-seq
differential-expression
protein-protein-interaction
normalization
linegraph
ngs-pipeline
publicdata
nmf-decomposition
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May 22, 2018 - Perl
ATAC-Seq Transcription Factor Footprint Discovery and Analysis
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May 25, 2018 - R
Processed single cell sequencing datasets
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May 28, 2018 - R
A tool to call CNV (Copy Number Variation) from bulk ATAC-Seq data
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Jun 4, 2018 - R
Analysing Capture Seq Count Data
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Jun 11, 2018 - R
Mouse / human control of cross-contaminations in single-cell ATAC-seq on Fluidigm C1
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Aug 14, 2018 - HTML
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Sep 13, 2018 - R
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Oct 3, 2018 - Python
ATAC-seq pipeline written in Nextflow
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Oct 8, 2018 - Nextflow
This pipeline has been superceeded. Please use >>>
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Oct 24, 2018 - Groovy
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