Taxonomy Classifer Using Gene Sequence.
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Updated
Aug 13, 2017 - Python
Taxonomy Classifer Using Gene Sequence.
Python scripts for Bioinformatics applications
analyzing bacterial genome based ontologies and phylogenomics informativeness
estimates genomes size using the flow cytometry
Tool for easily downloading and quantifying RNAseq data from the European Nucleotide Archive (ENA) with Salmon.
Contains solutions to problems posted on rosalind.info
plotting and summary information tools for the mRNA proteome to genome alignments.
Determines the most probable sequences missing from a greater set of genomic reads.
This program calculates the conservation index of a set of DNA or protein sequences
First semester bioinformatics project
Various codes and scripts used during AI research. Orginally developed in the Binary_label_predictions_with_CNNs repository
a API to BIGG metabolic databases
A script which counts the gaps in FASTA DNA sequences and reports their proportions in a CSV file
A bunch of scripts for actions I have to do on a regular basis
Simple bioinf pipeline incl. related sequences search, identifying regulatory regions and motifs, and enrichment analysis.
This is a collection of scripts for the bioinformatic analysis in the bachelor's thesis "Exploring the Potential of Camelid Single-Domain Antibodies: Structure, Properties and Diverse Applications in Therapeutics and Diagnostics" (2023). The scripts have been developed by Nora El-Zein, Nora Hemmingsson and Sara Mosebach.
Maps the evaluation value of phylogenetic tree to another tree
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