Code for our paper "Multi-scale Guided Attention for Medical Image Segmentation"

Detecting Pneumonia in Chest X-ray Images using Convolutional Neural Network and Pretrained Models

Fully automatic brain tumour segmentation using Deep 3-D convolutional neural networks

Cancer Detection from Microscopic Images by Fine-tuning Pre-trained Models ("Inception") for new class labels

Handling whole-slide images with region-level annotations.

An example of easytorch implementation on retinal vessel segmentation.

H&E ROI-Level and WSI-Level Nuclei Segmentation with HoVer-Net

Malaria Detection from Cell Images using Deep Learning - NasNetMobile Model

causalimages: An R package for performing causal inference with image and image sequence data

sMRI based depression classification using 3D volumetric convolutional networks

This repository contains all the machine learning algorithms studied in discipline "Engenharia Médica Aplicada" of Biomedical Engineering course at UNIFESP in the second semester of 2018. All the algorithms are written in both MatLab and Python Languages.

Biomedical Image Analysis with TensorFlow and DLTK

causalimages: An R package for performing causal inference with image and image sequence data

Code for brain tumor segmentaion

Detecting of COVID-19 induced Pneumonia in Chest X-ray Images using using Modified XceptionNet

This repository contains all the algorithms studied in discipline "Calculo Numerico" of Biomedical Engineering course at UNIFESP in the second semester of 2018.

Fully automatic brain tumor segmentation using the Modified 3DUNet architecture for Brats 2020 Challenge.

This repository contains all the image processing algorithms studied in discipline "Imagens Biomédicas" of Biomedical Engineering course at UNIFESP in the first semester of 2017. All the algorithms are written in both MatLab and Python Languages.

Intelligent analysis of Biomedical images course

An entry to the ISBI 2021 Cell Tracking Challenge that uses a Mask R-CNN neural network to detect and segment cells in 2D and 3D microscopy