Python library to handle Gene Ontology (GO) terms
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Updated
Nov 9, 2024 - Python
Python library to handle Gene Ontology (GO) terms
Multiple hypothesis testing in Python
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Generic enrichment analysis
A script and functions to group and validate MS Annika results.
Filter DE genes based on log2Folchange, FDR value or both
Iteratively randomly pooling scRNA-seq expressing a given gene from different numbers of cells and running DESeq2 with fdrtools correction to determine how many times which genes come out as enriched with said gene
Implementations of methods for online (sequential) multiple hypothesis testing.
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