analyse code genetic, app shiny

Advanced bioinformatics analysis of RNA sequencing data and genomic databases using R. Explore allelic imbalances, SNP variants, and phylogenetic trees to uncover genetic insights and visualize complex data interactions.

Code and raw data used in the analyses for: Trans-acting genetic variation affects the expression of adjacent genes via horizontal mechanisms.

Plot genetic relatedness estimators using R and ggplot2

Pipeline to compute associations between genome-wide trans QTL scores and phenotype of interest

Comprehensive KEGG Data Retrieval Using Multiple Sources

Using Bayesian Analysis (Monte Carlo simulation) to understand the difference between tumor genesis in types of mice from lab data

PhyloTrace is a GUI platform for bacterial monitoring offering a toolkit of analyses like hashed cgMLST typing and Antimicrobial Resistance Screening.

Setup and starter script for the PLINK R plugin.

MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/functions (including an example dataset) to carry out the MultiSKAT tests.

Create Hilbert curves in ggplot2

🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction