Next generation sequencing reads de novo assembler.
-
Updated
Dec 24, 2023 - C
Next generation sequencing reads de novo assembler.
GenomeTools genome analysis system.
parallelized blat with multi-threads support
Machine-learning-based general bacterial promoter prediction tool.
A tool for compression and analysis of DNA sequences
A dotplot generator for large chromosomes
Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads
Evaluating genome assemblies
map and call next generation genomic sequencing
Hapo-G is a tool that aims to improve the quality of genome assemblies by polishing the consensus with accurate reads.
SMIS: Single Molecular Integrative Scaffolding. A pipeline for scaffolding genome assemblies using long reads (PacBio, ONT)
blat with cluster parallel hybrid computing support
bvSFM (bit-vector sampled FM-index) is a tool for sequence alignment.
The Peaks software GitHub repository
Add a description, image, and links to the genome topic page so that developers can more easily learn about it.
To associate your repository with the genome topic, visit your repo's landing page and select "manage topics."