phenotypes
Here are 17 public repositories matching this topic...
🐟 Zebrafish Phenotype Ontology: Build Tools (OBSOLETE)
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Mar 13, 2018 - Java
Reference java implementation for phenopackets
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Sep 25, 2018 - Java
Bayesian ontology querying from Bauer et al.
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Nov 21, 2018 - Java
Code to generate ontology annotated objects (e.g. HPO annotated patients)
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Nov 29, 2018 - Java
Germinate Gatekeeper
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May 22, 2020 - Java
The QC software for the OBO version of HPO
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Oct 12, 2020 - Java
How do proliferation-migration tradeoffs affect phenotypic evolution in a tumors? In this off-lattice agent-based simulation the user can vary trade-off boundaries, death rate, and whether death occurs in response to demographic or environmental stochasticity. See the README file for details.
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Feb 9, 2021 - Java
Germinate is an open source plant database infrastructure and application programming platform on which complex data from genetic resource collections can be stored, queried and visualized using common, reusable programming components.
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Aug 24, 2021 - Java
Broker: simulates a server that receives the digital phenotypes built by the OpenDPMH framework.
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Mar 3, 2022 - Java
A phenotype-based tool for variant prioritization in WES and WGS data
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Nov 21, 2022 - Java
Runs CQL phenotype definitions against an OMOP repository
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Apr 14, 2023 - Java
The QC software for the OWL version of HPO (only text-checks, not so much logic included)
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Apr 7, 2024 - Java
phenol: Phenotype ontology library
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Apr 17, 2024 - Java
A Tool to Annotate and Prioritize Exome Variants
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May 3, 2024 - Java
Repository for the GA4GH phenopacket schema
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May 23, 2024 - Java
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