RAxML Next Generation: faster, easier-to-use and more flexible
-
Updated
Apr 30, 2024 - C++
RAxML Next Generation: faster, easier-to-use and more flexible
Efficient phylogenomic software by maximum likelihood
Ultrafast Sample Placement on Existing Trees
Analyze changes in gene family size and provide a statistical foundation for evolutionary inferences.
phylogenetics tools for linux (and other mostly posix compliant) computers
Version 5 of the CAFE phylogenetics software
Massively parallel phylogenetic placement of genetic sequences
A toolkit for analyzing and visualizing phylogenetic (placement) data
A library for working with phylogenetic and population genetic data.
♥ Fast and Accurate Estimation of Evolutionary Distances
Sequential Tree Sampler for online phylogenetics
Find bubbles in the Colored de Bruijn Graph to reconstruct phylogenetic trees
An HMM and Phylogenetic Placement based Ultra-Fast Taxonomy Assignment Tool for 16S sequencing
Tools for analyzing and comparing SARS-CoV-2 phylogenies
R package to calculate the similarity of two trees based on the number of shared four-taxon subtrees (or splits)
An R interface to the Nexus Class Library (C++) to read in quickly large phylogenetic trees and data
BayesCode, a Bayesian framework for phylogenetic comparative methods and phylogenetic codon models
A Bayesian Phylo-HMM for B cell receptor sequence analysis
Rapidly extract a flexible bacterial core genome alignment
Add a description, image, and links to the phylogenetics topic page so that developers can more easily learn about it.
To associate your repository with the phylogenetics topic, visit your repo's landing page and select "manage topics."