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quast

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Savagebd / comparative-bacterial-genomics-pipeline

Reusable comparative bacterial genomics pipeline for assembled bacterial genome FASTA files using QUAST, Bakta, FastANI, Panaroo, and FastTree.

bioinformatics comparative-genomics phylogeny quast fastani panaroo bacterial-genomics bakta genomics-pipeline

Updated May 27, 2026
Python

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