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Jan 12, 2020 - Python
rnaseq
Here are 44 public repositories matching this topic...
A python package for working with inputs to and outputs from the toil-rnaseq pipeline
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May 10, 2024 - Python
Snakemake workflow for the processing of RNAseq data
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Nov 2, 2023 - Python
A Snakemake pipeline for RNA Seq Variant Calling
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Mar 16, 2023 - Python
Build highly accurate transcripts from long-read RNA data
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Jul 30, 2020 - Python
A front-end GUI to map NGS DNA sequencing data using HISAT backend tool. This software offers robust seamless queueing of the mapping operations along with parameter memory for quick and easy customization.
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Mar 17, 2017 - Python
A cli for running multiple qsub jobs with HTSeq's htseq-count on a cluster.
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Feb 25, 2022 - Python
Quantifying splice junctions coverage from data released by STAR and mapping it to genome positions.
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Sep 15, 2022 - Python
Associate outliers with rare variation
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Apr 8, 2019 - Python
This repository contains the python package for Helical
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May 24, 2024 - Python
deep learning contamination filtering tool
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Jan 22, 2023 - Python
A collection of various tools useful for the deep analysis of data generated via the CRSSANT/rna2d3d pipeline.
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May 15, 2024 - Python
Snakemake+singularity RNAseq processing pipeline
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Dec 15, 2023 - Python
Package to study time series (or other series) multi-omics patterns of expresssion with replicates
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May 14, 2024 - Python
various tools that help with deep sequencing analysis
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Oct 26, 2023 - Python
Analysis of 4SU labeled (and unlabeled) total RNA samples.
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Oct 20, 2021 - Python
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