Data and code supporting research project into potential primary care shortages as a result of the COVID-19 pandemic.
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Updated
Jun 18, 2020 - R
Data and code supporting research project into potential primary care shortages as a result of the COVID-19 pandemic.
🇬🇧: Top 10 countries with the most COVID-19 cases arranged by deaths. Data from "COVID-19 Data Hub" (https://covid19datahub.io/) from package COVID19. 🇪🇸: Top 10 de países con más casos de COVID19 ordenado por fallecidos. Datos de "COVID-19 Data Hub" (https://covid19datahub.io/) a través del paquete COVID19.
Repository containing the codes used for the estimation of the incidence rate among healthcare workers in Egyptian quarantine hospitals, during the first wave of the SARS-CoV-2 pandemic.
COVID geospatial project for obstetrics & gynecology.
Predicting Infectivity: Comparing Four PCR-based Assays to Detect Culturable SARS-CoV-2 in Clinical Samples
Code, Data and Writing for the "COVID-19 Data Representativeness versus Actionability: An Avoidable Trade-Off?" paper by Nathanael Sheehan & Sabina Leonelli
Surveillance of wastewater for SARS-CoV-2 detection
VSPsnap is a collection of R and Python code for Gaussian Process regression in a kriging-like setting (i.e. two features (X,Y) and a target (Z)) - with a focus on SARS-CoV2 data (genomic/IR/FR).
Shiny App to visualize SARS-CoV-2 (COVID-19) pandemic development
time-discrete seir-model for predicting covid-19 scenarios written in r language for my bachelor-thesis
Precfinder is a tool to identify SARS-CoV-2 recombinants.
This repository contains the codes associated with the study "SARS-CoV-2 BW lineage, a fast-growing Omicron variant from southeast Mexico bearing relevant escape mutations". The first version of this work appeared on Research Square in November 2022 as preprint: https://doi.org/10.21203/rs.3.rs-2285898/v1
"COVID-19 Analyzer" web application for statistical analysis of COVID-19 related data. This software was created as part of my thesis engineering project.
Code and data used in Mollentze et al. (2022) "Variation in the ACE2 receptor has limited utility for SARS-CoV-2 host prediction".
A simple R code to support quality monitoring of the flow of SARS-CoV-2 results based on repetition among patients
Modeling the impact of mass events on the epidemiology of SARS-CoV-2
Code repository accompanying the paper by Agerer et al. (2021), Sci. Immunol.
Repository for Allergy Immunology and Cell Biology Unit (AICBU), University of Sri Jayewardenepura, Sri Lanka.
This repository contains a script for analyzing SARS-CoV-2 evolution in epitopes during the first two waves of the COVID-19 pandemic. The immunological data come from a high protein density array analysis of SARS-CoV-2 epitopes in 15 patients (N'Guessan A. et al., 2022). This script and the related data can be updated manually to integrate data …
Shiny app for creating Venn diagrams of SARS-CoV-2 variant/lineage mutations.
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