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splice-variants

Here are 4 public repositories matching this topic...

bcgsc / pavfinder

🔍 Post Assembly Variants Finder

bioinformatics rna-seq assembly structural-variants gene-fusions splice-variants

Updated Oct 7, 2022
Python

cmbi / Benchmarking_splice_prediction_tools

Analysis scripts used for the manuscript Benchmarking deep learning splice prediction tools using functional splice assays

splice-prediction splice-variants

Updated May 4, 2021
Python

IsoAligner

JacobHanimann / IsoAligner

IsoAligner: dynamic mapping of amino acid positions across protein isoforms

bioinformatics alternative-splicing protein-sequences sequence-to-sequence ucsc sequence-alignment uniprot-ids amino-acid-sequence aminoacid needleman-wunsch-algorithm refseq splice-variants exon-mapping protein-ids aminoacid-position protein-isoform

Updated Jun 14, 2022
Python

mtp-usz / IsoAligner

IsoAligner: dynamic mapping of amino acid positions across protein isoforms

rest-api alternative-splicing ensemble webtool ucsc uniprot sequence-alignment protein-sequence refseq splice-variants exon-mapping protein-ids aminoacid-position protein-isoform

Updated May 4, 2022
Python

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