Digital Expression Explorer 2 (DEE2): a repository of uniformly processed RNA-seq data
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Updated
Sep 10, 2024 - Shell
Digital Expression Explorer 2 (DEE2): a repository of uniformly processed RNA-seq data
Computational Biology & Bioinformatics Resources
🩺 Assessing StringTie, Salmon, and Kallisto with simulated RNA-Seq reads with noises introduced in read- and annotation-level.
Common BASH routines for computational biology
A tailored identification framework to depict the landscape of transcribed conserved non-coding elements (TCNEs)
Machine learning and bioinformatic workflows for gene discovery.
A protocol for applying low-coverage whole-genome sequencing data in structure variation studies
Complete Pipeline for RNA-seq data analysis: From FastQ to differntial gene expression to annotated Variations.
Data and scripts associated with H. limbata 2014 1st instar transcriptome
Workshops, Course Schedule and Teaching Assistant Review from my time as a chosen Undergraduate Teaching Assistant for the University of Pittsburgh course, BIOSC1540 - Computational Genomics taught by Dr. Miler Lee.
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