vcf-files
Here are 85 public repositories matching this topic...
echoverse module: Single- and multi-threaded downloading functions.
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May 10, 2024 - R
A Python GUI program with VCF file manipulation features like Creating, Searching.
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Jun 4, 2024
Predicting true low-VAF SNVs in HPV using triplicate NGS samples and machine learning
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Mar 12, 2024 - Jupyter Notebook
SAMtools and BCFtools (v1.10) for manipulating next-generation sequencing data, from bioconda
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May 18, 2020 - Dockerfile
Simple tool to merge VCF contacts.
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Jun 21, 2020 - PowerShell
Pipeline to analyze structural variants producing VCF files, then merge them and annotate if in Exon.
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Oct 9, 2020 - Nextflow
Merge in parallel, speeding up bcftools merge
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Oct 20, 2023 - Shell
A python parser for vcf bioinformatics file
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Feb 19, 2021 - Python
Modify KASP assay calls to a VCF format
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May 21, 2024 - Shell
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Sep 6, 2018 - Python
VCF (Variant Call Format) parser optimized for stream processing of large files
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Aug 7, 2020 - C++
Example files for Benin NGS capacity building project
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Oct 31, 2017 - HTML
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