Code used for simulation published in work:
Title: Multiple Mechanisms of Termination Modulate the Dynamics of RNAPI Transcription
Authors: Elisabeth Petfalski, Tomasz W. Turowski, Marie-Luise Winz, Katarzyna Grelewska-Nowotko and David Tollervey
This code is modification of the code published in:
Turowski, T.W., Petfalski, E., Goddard, B.D., French, S.L., Helwak, A., and Tollervey, D. (2020). Nascent transcript folding plays a major role in determining RNA polymerase elongation rates. Mol. Cell 79, 488-501. 10.1016/j.molcel.2020.06.002.