AWS
https://s3-us-west-2.amazonaws.com/stergachis-public1/index.html?prefix=
Want to load private data into your IGV session without making secret URLs that expire? It is actually be very simple! First on your local computer you create a file in this location:
~/.aws/credentials
(on windows the credentials file should be placed here: C:\Users\username\.aws\credentials)
and then add this information to the file:
[default]
region = us-west-2
aws_access_key_id =
aws_secret_access_key =
where you fill out aws_access_key_id and aws_secret_access_key with your information.
If you are using files from Kopah, then please create & edit the config file:
~/.aws/config
with the following information:
and then add this information to the file:
[default]
region = us-west-2
output = json
endpoint_url = https://s3.kopah.uw.edu
And once you do that you can open IGV and directly load bam files using the s3 path via load url:
