Skip to content

Sketchlib v1.5.0

Choose a tag to compare

View all tags
@johnlees johnlees released this 28 Sep 15:40
v1.5.0
5ece85f
This commit was created on GitHub.com and signed with GitHub’s verified signature. The key has expired.
GPG key ID: 4AEE18F83AFDEB23
Expired
Verified
Learn about vigilant mode.

New features:

  • Allow turning off random match computation (#28), which is useful for querying.
  • Replace threads with OpenMP (#31). Much more efficient CPU parallelisation of distances.
  • Add GPU/CPU hybrid sketching algorithm for read data (#32).
  • Add codon phased seeds --codon-phased (#35). This replaces randomly spaced seeds.

Bug fixes:

  • Update to work with HighFive v2.2.2
  • Check for zero Jaccard distances (#36)
Assets 2
Loading