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5.1.0

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@susannasiebert susannasiebert released this 30 Jun 18:44

What's Changed

  • fixing typo by @chrisamiller in #54
  • Update tests to run in newer Python versions by @susannasiebert in #64
  • Update the expression annotator to use the gene (ID) column in Kallisto files by @susannasiebert in #66
  • Update vcf-expression-annotator documentation to clarify custom id-column parameter by @susannasiebert in #67
  • Prevent ZeroDivisionError errors in log output by @susannasiebert in #68
  • Handle case in the ref-transcript-mismatch-reporter where there is no protein position annotation by @susannasiebert in #69
  • Output warning when VCF is annotated with the PICK flag but not transcript was PICK'ed by @susannasiebert in #70
  • Downgrade duplicate variant error to a warning and skip duplicates. by @susannasiebert in #71
  • Add per-strand allele counts when running vcf-readcount-annotator by @susannasiebert in #72

Full Changelog: v5.0.1...v5.1.0