5.5.1

What's Changed

This is a bugfix release. It fixes the following problem(s):

• Fix a couple of issues with the new --top-score-metric2 by @susannasiebert in #1291

• When adding the --top-score-metric2 option, the logic for determining the included candidates during aggregate report creation was amended to compare either the IC50 or percentile to the aggregate inclusion binding threshold. This logic should not have been changed and instead only the IC50 should be compared to the aggregate inclusion binding threshold, no matter which --top-score-metric2 was selected. This specific change has been reverted

• In order to achieve deterministic results when using the percentile --top-score-metric2 option, a peptides.sort() call was used. This release replaces this with a better way of finding the best peptide by using the IC50 as a secondary sort criteria.

Full Changelog: v5.5.0...v5.5.1