Understanding the Validation Report

Validation report summaries can be found in the folder where you ran seq-tools. Reports are separated into three categories:

• PASS: This status indicates that the payload(s) are ready for submission.

• PASS-with-WARNING: This status indicates that the payload(s) are ready for submission, however there may be a parameter you want to double check before submission.

• PASS-with-SKIPPED-check: This status indicates that the payload(s) are ready for submission, however you've skipped md5sum check that you may want to double check before submission.

• PASS-with-WARNING-and-SKIPPED-check: This status indicates that the payload(s) are ready for submission, however you've skipped md5sum check and there are some parameters that you may want to double check before submission.

• INVALID: This status indicates that the payload(s) are not ready for submission. The report will detail steps that failed with additional information in the run log $(pwd)/logs/$(date "+%Y_%m_%dT%H_%M_%S").log